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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015948714.1_cds_XP_016489890.1_80368
CDS Infomation

[gene=LOC107809732] [db_xref=GeneID:107809732] [protein=short-chain dehydrogenase TIC 32, chloroplastic-like] [protein_id=XP_016489890.1] [location=complement(join(9727..9939,10323..10369,10465..10549,11034..11112,11422..11575,11661..11740,11834..12065,14787..14898))] [gbkey=CDS]
Sequence

ATGTTGAGGCTGGTAACAGGACTAGCAGGGCCAAGTGGATTTGGATCAGCTTCCACCGCT
GAGCAGGTTACCGACGGCATCGATGCTAGTCCTCTCACTGCCATTGTTACAGGAGGTGCA
AGTGGCATTGGTCTGGAGACTGCAAGAGTTTTAGCACTGAGGAAAGCTCATATCATTATT
GCAGCAAGAAATATGGAGGCTGCAAATGAAGCAAAGCAAAGCATTTTGAAGGAAAATAAA
TCTGCTCGCATTGAAATTCTGAAACTCGACCTCAGCTCAATGAAATCGATCAAGGCATTT
GCAGATAATTTCCTCGCACTTAACCTTCCTCTCAACATCTTAATAAATAATGCAGGTATC
ATGTTCTGTCCATTTCAGCTTTCTGAGGATGGAATAGAGATGCAATTTGCCACAAATCAT
CTTGGTCATTTCTATTTGACTAATCTTCTTCTAGACAAAATGAAGGAAACAACAAAAGCA
ACTGGTATTGAGGGTAGGATTGTGAACTTGTCATCAGTAGCTCACATTTGTCCTTACTGG
GAAGGAATACAATTTCACAATGTCAATGACAAAAACAGTTATCAAGACAAACTGGCGTAT
GGACAATCAAAATTAGCCAACATATTACATGCCAATGAGCTATCCCGCCGCTTGCAGGAA
GAGGGAGTAAATATTACTGTTAATTCAGTTCATCCCGGTTTGATAATGACAAATCTGATG
AGACATTCAGCACTTCTTATGAGAATCTTAAGGGTATTCACTTGTTTCCTGTGGAAGAAT
GTCCCTCAGGGGGCAGCTACAACTTGTTATGTCGCCCTCCATCCAAGTTTGAAGGGAGTG
ACTGGAAAGTACTTTGTTGATTGCAATGAGTTCAAGCCAAGCAAGCTTGCACAAGATGAA
GTCTTAGCTCGGAATCTTTGGGATTTCAGCAACAATCTGGTCAATGCATCTCAAAAGATT
GACAAACAGAACACAGTCCTTGGAAATGCTACAAGTTATTAG

Peptide Sequence

PEP ID

XP_016489890.1
PEP Infomation

PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic-like [Nicotiana tabacum]
Sequence

MLRLVTGLAGPSGFGSASTAEQVTDGIDASPLTAIVTGGASGIGLETARVLALRKAHIII
AARNMEAANEAKQSILKENKSARIEILKLDLSSMKSIKAFADNFLALNLPLNILINNAGI
MFCPFQLSEDGIEMQFATNHLGHFYLTNLLLDKMKETTKATGIEGRIVNLSSVAHICPYW
EGIQFHNVNDKNSYQDKLAYGQSKLANILHANELSRRLQEEGVNITVNSVHPGLIMTNLM
RHSALLMRILRVFTCFLWKNVPQGAATTCYVALHPSLKGVTGKYFVDCNEFKPSKLAQDE
VLARNLWDFSNNLVNASQKIDKQNTVLGNATSY

Transcript Sequence

Gene sequence data has not been registered.